Publications

Mohr C., Polatkan A.C. et al "qPortal – A Science Gateway for Biomedical Applications", IWSG2016
Polatkan A.C., Nieselt K. "Collact.Me: Conceptual Framework for Extracting Domain-Specific Content from Twitter", SCA'2013, 2013 - download slides
Köse G., Polatkan A.C., Tonta Y., Ahmadlouei H. "Story Link Detection in Turkish Corpus", WI'2013, 2013 - download slides
Lehrmann A., Huber M., Polatkan A.C., Pritzkau A., Nieselt K. "Visualizing dimensionality reduction of systems biology data", Data Mining and Knowledge Discovery (268) Journal, Springer, 2012
Polatkan A.C., Ogul H., Sever H. "A Data Fusion Approach in Protein Homology Detection", International Conference on Biocomputation, Bioinformatics, and Biomedical Technologies, Biotechno'08, 2008

Awards

Most Creative Algorithm Award: For innovation in genomic data visualization and algortihmic analysis, Battke F., Herbig A., Jäger G., Polatkan A.C., Symons S., Nieselt K., University of Tübingen. iDEA Challenge, 2011 - iCommunity Newsletter

press & etc

University of Tübingen, #thatsmyscience Social Media Campaign - Read (in English)
Giant Brand Stories from Big Data, MediaCat Article - Read (in Turkish)
Turkish Informatics Association, Informatics Journal; volume 141, page 96 - Download (in Turkish)
Baskent University, Computer Science Department - from the graduates page

ongoing projects

ORDP: Open Research Data Portal

supervised theses

Collact.me Android App Development, 2014, Wahn N.
Mining von benutzerabhängigen Tweet-Inhalten und Berechnung von Relevanzwerten im Collact.me Framework, 2014, Weber P.
Design and Implementation of Administration and Enrichment Tools for the Collaborative Social Network Collact, completed in 2013, Lang M.
Extrahierung und Klassifizierung von Microblogging-Inhalten mit Anwendung auf bioinformatische Themen, completed in 2012, Begemann J.
Entwicklung einer Social Network API für Wissenschaftler, completed in 2012, Haug P.

supervised student projects

T2M - tweet to music, completed in 2013, Geißler A., Haist R., Moritz J.M., Tacke S.
VACS - visualize, align, comment and share, completed in 2012, Lang M., Heumos S., Weber P. - poster
Creating a social network for bioinformatics, completed in 2011, Haug P., Hohloch M.
Efficient trajectory analysis on football videos, completed in 2010, Schönfelder P.

completed projects

Collact.Me: conceptual framework for extracting domain-specific content from twitter - poster
Collact.De: collaborative social network - poster
MOOC and eLearning Platform for Bioinformatics project funded by the University of Tübingen
AiF NewPassage project funded by the AiF, Allianz Industrie Forschung
SpRay: a visual-analytics platform for large and high dimensional datasets project funded by DFG, Deutsche Forschungsgemeinshaft (German Research Foundation)
DiCoMa: Disaster Control Management [project manager]
Sakuwassa Eurostars Project [project manager]
Mansad Cyber Web Security [project manager]
Mantam Turkish Search Engine [project manager]
Research on Image Based Rendering and 3D Reconstruction of Image Based Data
Finding Patterns and Extracting Tactical Plans from Sports Data using Radio and Video
Research on Video Processing and Mining on Video Related Data
A Data Fusion Approach in Protein Homology Detection [ MSc Thesis ]
Computational Representation of Protein Sequences for Homology Detection
Obstacle Avoidance Approach for a Mobile Robot using Genetic Algorithms
Performance analysis comparison of GA, Hopfield nets and Kohonen SOM on TSP and MTSP
Artificial Neural Network Approach for Multiple Travelling Salesman Problem - Kohonen's SOM
App Development with J2ME, MIDP and Personal Java for Symbian OS, Symbian Programming
Stock Manager Automation System Design and Implementation
Web Services App Development for Central Bank of the Republic Of Turkey, R&D Department
ATS, Airline Ticketing System Documentation, Software Requirements and Design

Events

Sharing and Publishing of Human (Gen)Omics Data Workshop | 08-09 Jun 2016, Berlin
EUREKA Innovation Week 2016 | 26-29 Apr 2016, Stockholm
ITEA 2 PO Days 2015 | 22-23 Sep 2015, Brussels
Southside Festival | 19-21 Jun 2015, Neuhausen ob Eck ;)
TüBiT 2015 | 12 Jun 2015, Tübingen
Innovation Convention 2014 | 10-11 Mar 2014, Brussels
ITEA 3 Launch Event Germany | 26 Feb 2014, Nürnberg
Co-summit 2013: Software Innovation | 4-5 Dec 2013, Stockholm
Web Intelligence 2013 | 17-20 Nov 2013, Atlanta
ICT'2013 | 05-08 Nov 2013, Vilnius
Oktoberfest 2013 | 03-07 Oct 2013, München :)
3rd International SCA Conference | 30 Sep - 02 Oct 2013, Karlsruhe
2nd International LSDMA Symposium | 24 Sep 2013, Karlsruhe
Sziget Music Festival | 05-12 Aug 2013, Budapest ;)
TüBiT 2013 | 09 Jul 2013, Tübingen
Digital Night Stuttgart | 03 Jul 2013, Stuttgart
Herold Pitching Challenge | 13 Dec 2012, Vienna
Startup Weekend Stuttgart 2012 | 16-18 Nov 2012, Stuttgart
IBM-WSI Event | 16 Nov 2012, Tübingen
Pioneers Festival 2012 | 29-31 Oct 2012, Vienna
ICT Proposers' Day 2012 | 26-27 Sep 2012, Warsaw
DiCoMa Turkey Workshop | 01-06 Sep 2012, Antalya (organizer)
Roskilde Music Festival | 30 Jun - 9 Jul 2012, Roskilde ;)
Celtic-Plus Proposers' and Networking Day | 03 Jul 2012, Berlin
TüBiT 2012 | 29 Jun 2012, Tübingen
National Small Business Week | 20-26 May 2012, Washington, DC
ITEA 2 PO Days 2012 | 01-02 Feb 2012, Madrid
FET Proactive Info Day 2011 | 18 Jan 2012, Brussels
DiCoMa Kick-off Event | 10-14 Dec 2011, Empúries
E!nnovest, Investment Forum 2011 | 07 Dec 2011, Brussels
Sommerempfang der BioRegion STERN 2011 | 20 Jul 2011, Hohenheim
TüBit & ZBIT Jubiläum | 10 Jun 2011, Tübingen
International B2B Software Days 2011 | 30-31 Mar 2011, Vienna
ITEA 2 PO Days 2011 | 15-16 Feb 2011, Paris
Networked Media Systems 2010 | 25 Oct 2010, Brussels
ICT 2010 | 27-29 Sep 2010, Brussels
Interactive Visual Analysis for NLP Workshop 2010 | 17 Sep 2010, Stuttgart
Language Tech Days 2010 | 22-23 Mar 2010, Luxembourg
Vizbi EMBO Workshop 2010 | 03-05 Mar 2010, Heidelberg
ARTEMIS Spring Event 2010 | 01-02 Mar 2010, Nüremberg
ITEA 2 PO Days 2010 | 01-02 Feb 2010, Berlin
Innovation Days 2009 | 18-20 June 2009, Lisbon
ICT Proposers' Day 2009 | 22 Jan 2009, Budapest
Fraunhofer Gesellschaft Tubitak Joint Partner Event | 04-05 Nov 2008, Stuttgart
IV. Istanbul Call Center Conference | 16-17 Sep 2008, Istanbul
BioTechno 2008 | 29 Jun - 05 Jul 2008, Bucharest
Brokerage Event 2 | 22-23 Nov 2007, Aalborg
7th Research Framework Info Day | 05 Jun 2006, Istanbul
Microsoft Academic Days | 04-06 May 2005, Istanbul

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